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iupac.xml
src/py/data/iupac.xml
iupac.xml
—
Extensible Markup Language (XML),
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<!--
Authors: Michael Habeck
Wolfgang Rieping
Institut Pasteur, Paris
Copyright (C) 2003 Michael Habeck and Wolfgang Rieping
No warranty implied or expressed.
All rights reserved.
$Author: rieping $
$Revision: 1.2 $
$Date: 2003/03/06 14:08:33 $
-->
<!DOCTYPE topology SYSTEM "topology1.0.dtd">
<topology description="Amino acid definitions following the IUPAC convention" name="IUPAC">
<residue residue_type="AMINO_ACID" name="CYS">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="N" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="SG" atom_type="S" hetero="None"/>
<atom name="HG" atom_type="H" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HB2"/>
<atom_name name="HB3"/>
<atom_name name="SG"/>
<atom_name name="HG"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="ASP">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="OD1" atom_type="O" hetero="None"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<atom name="OD2" atom_type="O" hetero="None"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HB2"/>
<atom_name name="HB3"/>
<atom_name name="OD1"/>
<atom_name name="OD2"/>
<atom_name name="CG"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="SER">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="OG" atom_type="O" hetero="None"/>
<atom name="HG" atom_type="H" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="OG"/>
<atom_name name="HG"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="GLN">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="HE22" atom_type="H" hetero="NE2"/>
<atom name="HE21" atom_type="H" hetero="NE2"/>
<atom name="NE2" atom_type="N" hetero="None"/>
<atom name="OE1" atom_type="O" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HG2"/>
<atom_name name="CG"/>
<atom_name name="HG3"/>
<atom_name name="CD"/>
<atom_name name="HE22"/>
<atom_name name="HE21"/>
<atom_name name="NE2"/>
<atom_name name="OE1"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HE21"/>
<atom_name name="HE22"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="LYS">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="CE" atom_type="C" hetero="None"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="HD3" atom_type="H" hetero="CD"/>
<atom name="HD2" atom_type="H" hetero="CD"/>
<atom name="HE2" atom_type="H" hetero="CE"/>
<atom name="HE3" atom_type="H" hetero="CE"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="NZ" atom_type="N" hetero="None"/>
<atom name="HZ1" atom_type="H" hetero="NZ"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HZ3" atom_type="H" hetero="NZ"/>
<atom name="HZ2" atom_type="H" hetero="NZ"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="CG"/>
<atom_name name="CE"/>
<atom_name name="CD"/>
<atom_name name="HD3"/>
<atom_name name="HD2"/>
<atom_name name="HE2"/>
<atom_name name="HE3"/>
<atom_name name="HG2"/>
<atom_name name="HG3"/>
<atom_name name="NZ"/>
<atom_name name="HZ1"/>
<atom_name name="HB3"/>
<atom_name name="HZ3"/>
<atom_name name="HZ2"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYL">
<atom_name name="HZ1"/>
<atom_name name="HZ2"/>
<atom_name name="HZ3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HD2"/>
<atom_name name="HD3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HE2"/>
<atom_name name="HE3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="THR">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="CG2" atom_type="C" hetero="None"/>
<atom name="HG22" atom_type="H" hetero="CG2"/>
<atom name="OG1" atom_type="O" hetero="None"/>
<atom name="HG1" atom_type="H" hetero="None"/>
<atom name="HB" atom_type="H" hetero="CB"/>
<atom name="HG21" atom_type="H" hetero="CG2"/>
<atom name="HG23" atom_type="H" hetero="CG2"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="CG2"/>
<atom_name name="HG22"/>
<atom_name name="OG1"/>
<atom_name name="HG1"/>
<atom_name name="HB"/>
<atom_name name="HG21"/>
<atom_name name="HG23"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYL">
<atom_name name="HG21"/>
<atom_name name="HG22"/>
<atom_name name="HG23"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="PRO">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HD3" atom_type="H" hetero="CD"/>
<atom name="HD2" atom_type="H" hetero="CD"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HD3"/>
<atom_name name="HD2"/>
<atom_name name="HG2"/>
<atom_name name="HG3"/>
<atom_name name="CD"/>
<atom_name name="CG"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_AMINYL">
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HD2"/>
<atom_name name="HD3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="HIS">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HE2" atom_type="H" hetero="NE2"/>
<atom name="CE1" atom_type="C" hetero="None"/>
<atom name="HD1" atom_type="H" hetero="ND1"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HE1" atom_type="H" hetero="CE1"/>
<atom name="HD2" atom_type="H" hetero="CD2"/>
<atom name="CD2" atom_type="C" hetero="None"/>
<atom name="ND1" atom_type="N" hetero="None"/>
<atom name="NE2" atom_type="N" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HE2"/>
<atom_name name="CE1"/>
<atom_name name="HD1"/>
<atom_name name="CG"/>
<atom_name name="HE1"/>
<atom_name name="HD2"/>
<atom_name name="CD2"/>
<atom_name name="ND1"/>
<atom_name name="NE2"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="PHE">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HZ" atom_type="H" hetero="CZ"/>
<atom name="HE2" atom_type="H" hetero="CE2"/>
<atom name="CE1" atom_type="C" hetero="None"/>
<atom name="HD1" atom_type="H" hetero="CD1"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HE1" atom_type="H" hetero="CE1"/>
<atom name="CZ" atom_type="C" hetero="None"/>
<atom name="HD2" atom_type="H" hetero="CD2"/>
<atom name="CE2" atom_type="C" hetero="None"/>
<atom name="CD2" atom_type="C" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="CD1" atom_type="C" hetero="None"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HZ"/>
<atom_name name="HE2"/>
<atom_name name="CE1"/>
<atom_name name="HD1"/>
<atom_name name="HB2"/>
<atom_name name="CG"/>
<atom_name name="HE1"/>
<atom_name name="CZ"/>
<atom_name name="HD2"/>
<atom_name name="CE2"/>
<atom_name name="CD2"/>
<atom_name name="HB3"/>
<atom_name name="CD1"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="AROMATIC">
<atom_name name="HD1"/>
<atom_name name="HD2"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="HE1"/>
<atom_name name="HE2"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="HD1"/>
<atom_name name="HD2"/>
<atom_name name="HE1"/>
<atom_name name="HE2"/>
<atom_name name="HZ"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="ASN">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="ND2" atom_type="N" hetero="None"/>
<atom name="HD22" atom_type="H" hetero="ND2"/>
<atom name="HD21" atom_type="H" hetero="ND2"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="OD1" atom_type="O" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="ND2"/>
<atom_name name="HD22"/>
<atom_name name="HD21"/>
<atom_name name="CG"/>
<atom_name name="OD1"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HD21"/>
<atom_name name="HD22"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="GLY">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HA2" atom_type="H" hetero="CA"/>
<atom name="HA3" atom_type="H" hetero="CA"/>
<backbone>
<atom_name name="C"/>
<atom_name name="N"/>
<atom_name name="CA"/>
</backbone>
<sidechain>
<atom_name name="HA3"/>
<atom_name name="HA2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HA2"/>
<atom_name name="HA3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="ILE">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="CG2" atom_type="C" hetero="None"/>
<atom name="HG22" atom_type="H" hetero="CG2"/>
<atom name="HG21" atom_type="H" hetero="CG2"/>
<atom name="CG1" atom_type="C" hetero="None"/>
<atom name="HG12" atom_type="H" hetero="CG1"/>
<atom name="HG13" atom_type="H" hetero="CG1"/>
<atom name="HD13" atom_type="H" hetero="CD1"/>
<atom name="CD1" atom_type="C" hetero="None"/>
<atom name="HB" atom_type="H" hetero="CB"/>
<atom name="HD12" atom_type="H" hetero="CD1"/>
<atom name="HD11" atom_type="H" hetero="CD1"/>
<atom name="HG23" atom_type="H" hetero="CG2"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="CG2"/>
<atom_name name="HG22"/>
<atom_name name="HG21"/>
<atom_name name="CG1"/>
<atom_name name="HG12"/>
<atom_name name="HG13"/>
<atom_name name="HD13"/>
<atom_name name="CD1"/>
<atom_name name="HB"/>
<atom_name name="HD12"/>
<atom_name name="HD11"/>
<atom_name name="HG23"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYL">
<atom_name name="HG21"/>
<atom_name name="HG22"/>
<atom_name name="HG23"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="HD11"/>
<atom_name name="HD12"/>
<atom_name name="HD13"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG12"/>
<atom_name name="HG13"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="LEU">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HD22" atom_type="H" hetero="CD2"/>
<atom name="HD23" atom_type="H" hetero="CD2"/>
<atom name="HD21" atom_type="H" hetero="CD2"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="CD1" atom_type="C" hetero="None"/>
<atom name="CD2" atom_type="C" hetero="None"/>
<atom name="HD13" atom_type="H" hetero="CD1"/>
<atom name="HD12" atom_type="H" hetero="CD1"/>
<atom name="HD11" atom_type="H" hetero="CD1"/>
<atom name="HG" atom_type="H" hetero="CG"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HD22"/>
<atom_name name="HD23"/>
<atom_name name="HD21"/>
<atom_name name="CG"/>
<atom_name name="CD1"/>
<atom_name name="CD2"/>
<atom_name name="HD13"/>
<atom_name name="HD12"/>
<atom_name name="HD11"/>
<atom_name name="HG"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="ISOPROPYL">
<atom_name name="HD11"/>
<atom_name name="HD12"/>
<atom_name name="HD13"/>
<atom_name name="HD21"/>
<atom_name name="HD22"/>
<atom_name name="HD23"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="HD21"/>
<atom_name name="HD22"/>
<atom_name name="HD23"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="HD11"/>
<atom_name name="HD12"/>
<atom_name name="HD13"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="ARG">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="NE" atom_type="N" hetero="None"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="CZ" atom_type="C" hetero="None"/>
<atom name="NH1" atom_type="N" hetero="None"/>
<atom name="NH2" atom_type="N" hetero="None"/>
<atom name="HE" atom_type="H" hetero="NE"/>
<atom name="HD3" atom_type="H" hetero="CD"/>
<atom name="HD2" atom_type="H" hetero="CD"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="HH22" atom_type="H" hetero="NH2"/>
<atom name="HH21" atom_type="H" hetero="NH2"/>
<atom name="HH12" atom_type="H" hetero="NH1"/>
<atom name="HH11" atom_type="H" hetero="NH1"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="NE"/>
<atom_name name="CG"/>
<atom_name name="CD"/>
<atom_name name="CZ"/>
<atom_name name="NH1"/>
<atom_name name="NH2"/>
<atom_name name="HE"/>
<atom_name name="HD3"/>
<atom_name name="HD2"/>
<atom_name name="HG2"/>
<atom_name name="HG3"/>
<atom_name name="HH22"/>
<atom_name name="HH21"/>
<atom_name name="HH12"/>
<atom_name name="HH11"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HD2"/>
<atom_name name="HD3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HH11"/>
<atom_name name="HH12"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HH21"/>
<atom_name name="HH22"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="TRP">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HH2" atom_type="H" hetero="CH2"/>
<atom name="CZ2" atom_type="C" hetero="None"/>
<atom name="CZ3" atom_type="C" hetero="None"/>
<atom name="HZ2" atom_type="H" hetero="CZ2"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="CE3" atom_type="C" hetero="None"/>
<atom name="CE2" atom_type="C" hetero="None"/>
<atom name="CD2" atom_type="C" hetero="None"/>
<atom name="CD1" atom_type="C" hetero="None"/>
<atom name="HE1" atom_type="H" hetero="NE1"/>
<atom name="HD1" atom_type="H" hetero="CD1"/>
<atom name="HE3" atom_type="H" hetero="CE3"/>
<atom name="CH2" atom_type="C" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HZ3" atom_type="H" hetero="CZ3"/>
<atom name="NE1" atom_type="N" hetero="None"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HH2"/>
<atom_name name="CZ2"/>
<atom_name name="CZ3"/>
<atom_name name="HZ2"/>
<atom_name name="CG"/>
<atom_name name="CE3"/>
<atom_name name="CE2"/>
<atom_name name="CD2"/>
<atom_name name="CD1"/>
<atom_name name="HE1"/>
<atom_name name="HD1"/>
<atom_name name="HE3"/>
<atom_name name="CH2"/>
<atom_name name="HB3"/>
<atom_name name="HZ3"/>
<atom_name name="NE1"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="ALA">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HB1" atom_type="H" hetero="CB"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HB1"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYL">
<atom_name name="HB1"/>
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="VAL">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="CG2" atom_type="C" hetero="None"/>
<atom name="HG22" atom_type="H" hetero="CG2"/>
<atom name="HG21" atom_type="H" hetero="CG2"/>
<atom name="CG1" atom_type="C" hetero="None"/>
<atom name="HG11" atom_type="H" hetero="CG1"/>
<atom name="HG12" atom_type="H" hetero="CG1"/>
<atom name="HG13" atom_type="H" hetero="CG1"/>
<atom name="HB" atom_type="H" hetero="CB"/>
<atom name="HG23" atom_type="H" hetero="CG2"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="CG2"/>
<atom_name name="HG22"/>
<atom_name name="HG21"/>
<atom_name name="CG1"/>
<atom_name name="HG11"/>
<atom_name name="HG12"/>
<atom_name name="HG13"/>
<atom_name name="HB"/>
<atom_name name="HG23"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="ISOPROPYL">
<atom_name name="HG11"/>
<atom_name name="HG12"/>
<atom_name name="HG13"/>
<atom_name name="HG21"/>
<atom_name name="HG22"/>
<atom_name name="HG23"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="HG21"/>
<atom_name name="HG22"/>
<atom_name name="HG23"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="HG11"/>
<atom_name name="HG12"/>
<atom_name name="HG13"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="GLU">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="OE2" atom_type="O" hetero="None"/>
<atom name="OE1" atom_type="O" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HG2"/>
<atom_name name="HG3"/>
<atom_name name="CD"/>
<atom_name name="CG"/>
<atom_name name="OE2"/>
<atom_name name="OE1"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="TYR">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HE2" atom_type="H" hetero="CE2"/>
<atom name="CE1" atom_type="C" hetero="None"/>
<atom name="HD1" atom_type="H" hetero="CD1"/>
<atom name="OH" atom_type="O" hetero="None"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HE1" atom_type="H" hetero="CE1"/>
<atom name="CZ" atom_type="C" hetero="None"/>
<atom name="HH" atom_type="H" hetero="None"/>
<atom name="HD2" atom_type="H" hetero="CD2"/>
<atom name="CE2" atom_type="C" hetero="None"/>
<atom name="CD2" atom_type="C" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="CD1" atom_type="C" hetero="None"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HE2"/>
<atom_name name="CE1"/>
<atom_name name="HD1"/>
<atom_name name="OH"/>
<atom_name name="HB2"/>
<atom_name name="CG"/>
<atom_name name="HE1"/>
<atom_name name="CZ"/>
<atom_name name="HH"/>
<atom_name name="HD2"/>
<atom_name name="CE2"/>
<atom_name name="CD2"/>
<atom_name name="HB3"/>
<atom_name name="CD1"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="AROMATIC">
<atom_name name="HD1"/>
<atom_name name="HD2"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="HE1"/>
<atom_name name="HE2"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="HD1"/>
<atom_name name="HD2"/>
<atom_name name="HE1"/>
<atom_name name="HE2"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="MET">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="HE1" atom_type="H" hetero="CE"/>
<atom name="HE2" atom_type="H" hetero="CE"/>
<atom name="HE3" atom_type="H" hetero="CE"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="CE" atom_type="C" hetero="None"/>
<atom name="SD" atom_type="S" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HG2"/>
<atom_name name="HE1"/>
<atom_name name="HE2"/>
<atom_name name="HE3"/>
<atom_name name="CG"/>
<atom_name name="HG3"/>
<atom_name name="CE"/>
<atom_name name="SD"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYL">
<atom_name name="HE1"/>
<atom_name name="HE2"/>
<atom_name name="HE3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="CYC">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="N" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="SG" atom_type="S" hetero="None"/>
<atom name="HG" atom_type="H" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="HE22" atom_type="H" hetero="NE2"/>
<atom name="HE21" atom_type="H" hetero="NE2"/>
<atom name="NE2" atom_type="N" hetero="None"/>
<atom name="OE1" atom_type="O" hetero="None"/>
<atom name="OC" atom_type="O" hetero="None"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HB2"/>
<atom_name name="HB3"/>
<atom_name name="SG"/>
<atom_name name="CG"/>
<atom_name name="HG3"/>
<atom_name name="HG2"/>
<atom_name name="CD"/>
<atom_name name="OC"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="OE1"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="OE1"/>
<atom_name name="NE2"/>
<atom_name name="HE22"/>
<atom_name name="HE21"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="OE1"/>
<atom_name name="NE2"/>
<atom_name name="HE22"/>
<atom_name name="HE21"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="HE22"/>
<atom_name name="HE21"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="GLX">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="HE22" atom_type="H" hetero="NE2"/>
<atom name="HE21" atom_type="H" hetero="NE2"/>
<atom name="NE2" atom_type="N" hetero="None"/>
<atom name="OE1" atom_type="O" hetero="None"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="HG2"/>
<atom_name name="CG"/>
<atom_name name="HG3"/>
<atom_name name="CD"/>
<atom_name name="HE22"/>
<atom_name name="HE21"/>
<atom_name name="NE2"/>
<atom_name name="OE1"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HE21"/>
<atom_name name="HE22"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="GLI">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="HA2" atom_type="H" hetero="CA"/>
<atom name="HA3" atom_type="H" hetero="CA"/>
<backbone>
<atom_name name="C"/>
<atom_name name="N"/>
<atom_name name="CA"/>
</backbone>
<sidechain>
<atom_name name="HA3"/>
<atom_name name="HA2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HA2"/>
<atom_name name="HA3"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="AMINO_ACID" name="NLE">
<atom name="C" atom_type="C" hetero="None"/>
<atom name="H" atom_type="H" hetero="N"/>
<atom name="CA" atom_type="C" hetero="None"/>
<atom name="O" atom_type="O" hetero="None"/>
<atom name="N" atom_type="N" hetero="None"/>
<atom name="CB" atom_type="C" hetero="None"/>
<atom name="HA" atom_type="H" hetero="CA"/>
<atom name="O'" atom_type="O" hetero="None"/>
<atom name="O''" atom_type="O" hetero="None"/>
<atom name="NT" atom_type="N" hetero="None"/>
<atom name="HT" atom_type="H" hetero="NT"/>
<atom name="H1" atom_type="H" hetero="N"/>
<atom name="H2" atom_type="H" hetero="N"/>
<atom name="H3" atom_type="H" hetero="N"/>
<atom name="CG" atom_type="C" hetero="None"/>
<atom name="CE1" atom_type="C" hetero="None"/>
<atom name="CD" atom_type="C" hetero="None"/>
<atom name="HD3" atom_type="H" hetero="CD"/>
<atom name="HD2" atom_type="H" hetero="CD"/>
<atom name="HE12" atom_type="H" hetero="CE1"/>
<atom name="HE11" atom_type="H" hetero="CE1"/>
<atom name="HE13" atom_type="H" hetero="CE1"/>
<atom name="HG2" atom_type="H" hetero="CG"/>
<atom name="HG3" atom_type="H" hetero="CG"/>
<atom name="HB3" atom_type="H" hetero="CB"/>
<atom name="HB2" atom_type="H" hetero="CB"/>
<backbone>
<atom_name name="N"/>
<atom_name name="CA"/>
<atom_name name="HA"/>
<atom_name name="C"/>
</backbone>
<sidechain>
<atom_name name="CB"/>
<atom_name name="CG"/>
<atom_name name="CE1"/>
<atom_name name="CD"/>
<atom_name name="HD3"/>
<atom_name name="HD2"/>
<atom_name name="HE12"/>
<atom_name name="HE13"/>
<atom_name name="HE11"/>
<atom_name name="HG2"/>
<atom_name name="HG3"/>
<atom_name name="HB3"/>
<atom_name name="HB2"/>
</sidechain>
<terminus terminus_type="N_STANDARD">
<atom_name name="H"/>
</terminus>
<terminus terminus_type="N_AMINYL">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</terminus>
<terminus terminus_type="C_STANDARD">
<atom_name name="O"/>
</terminus>
<terminus terminus_type="C_AMIDO">
<atom_name name="O'"/>
<atom_name name="NT"/>
<atom_name name="HT"/>
</terminus>
<terminus terminus_type="C_CARBOXYL">
<atom_name name="O'"/>
<atom_name name="O''"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="HB2"/>
<atom_name name="HB3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HG2"/>
<atom_name name="HG3"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="HD2"/>
<atom_name name="HD3"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="HE12"/>
<atom_name name="HE11"/>
<atom_name name="HE13"/>
</equivalent_group>
<equivalent_group group_type="NTERMINUS">
<atom_name name="H1"/>
<atom_name name="H2"/>
<atom_name name="H3"/>
</equivalent_group>
</residue>
<residue residue_type="DNA_BASE" name="ADE">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="H2''" atom_type="H" hetero="C2'"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N9" atom_type="N" hetero="None"/>
<atom name="C8" atom_type="C" hetero="None"/>
<atom name="N7" atom_type="N" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="N6" atom_type="N" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="H8" atom_type="H" hetero="C8"/>
<atom name="H61" atom_type="H" hetero="N6"/>
<atom name="H62" atom_type="H" hetero="N6"/>
<atom name="H2" atom_type="H" hetero="C2"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="H2''"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N1"/>
<atom_name name="C2"/>
<atom_name name="H2"/>
<atom_name name="N3"/>
<atom_name name="C4"/>
<atom_name name="C5"/>
<atom_name name="C6"/>
<atom_name name="N6"/>
<atom_name name="H61"/>
<atom_name name="H62"/>
<atom_name name="N7"/>
<atom_name name="C8"/>
<atom_name name="H8"/>
<atom_name name="N9"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="H2'"/>
<atom_name name="H2''"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="H61"/>
<atom_name name="H62"/>
</equivalent_group>
</residue>
<residue residue_type="DNA_BASE" name="CYT">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="H2''" atom_type="H" hetero="C2'"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="N4" atom_type="N" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="O2" atom_type="O" hetero="None"/>
<atom name="H41" atom_type="H" hetero="N4"/>
<atom name="H42" atom_type="H" hetero="N4"/>
<atom name="H5" atom_type="H" hetero="C5"/>
<atom name="H6" atom_type="H" hetero="C6"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="H2''"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N1"/>
<atom_name name="C6"/>
<atom_name name="C5"/>
<atom_name name="C4"/>
<atom_name name="N4"/>
<atom_name name="N3"/>
<atom_name name="C2"/>
<atom_name name="O2"/>
<atom_name name="H41"/>
<atom_name name="H42"/>
<atom_name name="H5"/>
<atom_name name="H6"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="H2'"/>
<atom_name name="H2''"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="H41"/>
<atom_name name="H42"/>
</equivalent_group>
</residue>
<residue residue_type="DNA_BASE" name="GUA">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="H2''" atom_type="H" hetero="C2'"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N9" atom_type="N" hetero="None"/>
<atom name="C8" atom_type="C" hetero="None"/>
<atom name="N7" atom_type="N" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="O6" atom_type="O" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="N2" atom_type="N" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="H8" atom_type="H" hetero="C8"/>
<atom name="H1" atom_type="H" hetero="N1"/>
<atom name="H21" atom_type="H" hetero="N2"/>
<atom name="H22" atom_type="H" hetero="N2"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="H2''"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N9"/>
<atom_name name="C8"/>
<atom_name name="N7"/>
<atom_name name="C5"/>
<atom_name name="C6"/>
<atom_name name="O6"/>
<atom_name name="N1"/>
<atom_name name="C2"/>
<atom_name name="N2"/>
<atom_name name="N3"/>
<atom_name name="C4"/>
<atom_name name="H8"/>
<atom_name name="H1"/>
<atom_name name="H21"/>
<atom_name name="H22"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="H2'"/>
<atom_name name="H2''"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="H21"/>
<atom_name name="H22"/>
</equivalent_group>
</residue>
<residue residue_type="DNA_BASE" name="THY">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="H2''" atom_type="H" hetero="C2'"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="O4" atom_type="O" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="O2" atom_type="O" hetero="None"/>
<atom name="C7" atom_type="C" hetero="None"/>
<atom name="H3" atom_type="H" hetero="N3"/>
<atom name="H71" atom_type="H" hetero="C7"/>
<atom name="H72" atom_type="H" hetero="C7"/>
<atom name="H73" atom_type="H" hetero="C7"/>
<atom name="H6" atom_type="H" hetero="C6"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="H2''"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N1"/>
<atom_name name="C6"/>
<atom_name name="C5"/>
<atom_name name="C4"/>
<atom_name name="O4"/>
<atom_name name="N3"/>
<atom_name name="C2"/>
<atom_name name="O2"/>
<atom_name name="C7"/>
<atom_name name="H3"/>
<atom_name name="H71"/>
<atom_name name="H72"/>
<atom_name name="H73"/>
<atom_name name="H6"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="METHYLENE">
<atom_name name="H2'"/>
<atom_name name="H2''"/>
</equivalent_group>
<equivalent_group group_type="METHYL">
<atom_name name="H71"/>
<atom_name name="H72"/>
<atom_name name="H73"/>
</equivalent_group>
</residue>
<residue residue_type="RNA_BASE" name="ADE">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="O2'" atom_type="H" hetero="None"/>
<atom name="HO2'" atom_type="H" hetero="None"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N9" atom_type="N" hetero="None"/>
<atom name="C8" atom_type="C" hetero="None"/>
<atom name="N7" atom_type="N" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="N6" atom_type="N" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="H8" atom_type="H" hetero="C8"/>
<atom name="H61" atom_type="H" hetero="N6"/>
<atom name="H62" atom_type="H" hetero="N6"/>
<atom name="H2" atom_type="H" hetero="C2"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="O2'"/>
<atom_name name="HO2'"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N1"/>
<atom_name name="C2"/>
<atom_name name="H2"/>
<atom_name name="N3"/>
<atom_name name="C4"/>
<atom_name name="C5"/>
<atom_name name="C6"/>
<atom_name name="N6"/>
<atom_name name="H61"/>
<atom_name name="H62"/>
<atom_name name="N7"/>
<atom_name name="C8"/>
<atom_name name="H8"/>
<atom_name name="N9"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="H61"/>
<atom_name name="H62"/>
</equivalent_group>
</residue>
<residue residue_type="RNA_BASE" name="CYT">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="O2'" atom_type="O" hetero="None"/>
<atom name="HO2'" atom_type="H" hetero="None"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="N4" atom_type="N" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="O2" atom_type="O" hetero="None"/>
<atom name="H41" atom_type="H" hetero="N4"/>
<atom name="H42" atom_type="H" hetero="N4"/>
<atom name="H5" atom_type="H" hetero="C5"/>
<atom name="H6" atom_type="H" hetero="C6"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="O2'"/>
<atom_name name="HO2'"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N1"/>
<atom_name name="C6"/>
<atom_name name="C5"/>
<atom_name name="C4"/>
<atom_name name="N4"/>
<atom_name name="N3"/>
<atom_name name="C2"/>
<atom_name name="O2"/>
<atom_name name="H41"/>
<atom_name name="H42"/>
<atom_name name="H5"/>
<atom_name name="H6"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="H41"/>
<atom_name name="H42"/>
</equivalent_group>
</residue>
<residue residue_type="RNA_BASE" name="GUA">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="O2'" atom_type="O" hetero="None"/>
<atom name="HO2'" atom_type="H" hetero="None"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N9" atom_type="N" hetero="None"/>
<atom name="C8" atom_type="C" hetero="None"/>
<atom name="N7" atom_type="N" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="O6" atom_type="O" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="N2" atom_type="N" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="H8" atom_type="H" hetero="C8"/>
<atom name="H1" atom_type="H" hetero="N1"/>
<atom name="H21" atom_type="H" hetero="N2"/>
<atom name="H22" atom_type="H" hetero="N2"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="O2'"/>
<atom_name name="HO2'"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N9"/>
<atom_name name="C8"/>
<atom_name name="N7"/>
<atom_name name="C5"/>
<atom_name name="C6"/>
<atom_name name="O6"/>
<atom_name name="N1"/>
<atom_name name="C2"/>
<atom_name name="N2"/>
<atom_name name="N3"/>
<atom_name name="C4"/>
<atom_name name="H8"/>
<atom_name name="H1"/>
<atom_name name="H21"/>
<atom_name name="H22"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
<equivalent_group group_type="AROMATIC">
<atom_name name="H21"/>
<atom_name name="H22"/>
</equivalent_group>
</residue>
<residue residue_type="RNA_BASE" name="URA">
<atom name="C3'" atom_type="C" hetero="None"/>
<atom name="O3'" atom_type="O" hetero="None"/>
<atom name="O5'" atom_type="O" hetero="None"/>
<atom name="C5'" atom_type="C" hetero="None"/>
<atom name="C4'" atom_type="C" hetero="None"/>
<atom name="O4'" atom_type="O" hetero="None"/>
<atom name="C1'" atom_type="C" hetero="None"/>
<atom name="C2'" atom_type="C" hetero="None"/>
<atom name="H5'" atom_type="H" hetero="C5'"/>
<atom name="H5''" atom_type="H" hetero="C5'"/>
<atom name="H4'" atom_type="H" hetero="C4'"/>
<atom name="H3'" atom_type="H" hetero="C3'"/>
<atom name="H2'" atom_type="H" hetero="C2'"/>
<atom name="O2'" atom_type="O" hetero="None"/>
<atom name="HO2'" atom_type="H" hetero="None"/>
<atom name="H1'" atom_type="H" hetero="C1'"/>
<atom name="P" atom_type="P" hetero="None"/>
<atom name="OP1" atom_type="O" hetero="None"/>
<atom name="OP2" atom_type="O" hetero="None"/>
<atom name="HO3'" atom_type="H" hetero="None"/>
<atom name="HO5'" atom_type="H" hetero="None"/>
<atom name="N1" atom_type="N" hetero="None"/>
<atom name="C6" atom_type="C" hetero="None"/>
<atom name="C5" atom_type="C" hetero="None"/>
<atom name="C4" atom_type="C" hetero="None"/>
<atom name="O4" atom_type="O" hetero="None"/>
<atom name="N3" atom_type="N" hetero="None"/>
<atom name="C2" atom_type="C" hetero="None"/>
<atom name="O2" atom_type="O" hetero="None"/>
<atom name="H3" atom_type="H" hetero="N3"/>
<atom name="H5" atom_type="H" hetero="C5"/>
<atom name="H6" atom_type="H" hetero="C6"/>
<backbone>
<atom_name name="C1'"/>
<atom_name name="H1'"/>
<atom_name name="C2'"/>
<atom_name name="H2'"/>
<atom_name name="HO2'"/>
<atom_name name="O2'"/>
<atom_name name="C3'"/>
<atom_name name="O3'"/>
<atom_name name="H3'"/>
<atom_name name="C4'"/>
<atom_name name="O4'"/>
<atom_name name="H4'"/>
<atom_name name="O5'"/>
<atom_name name="C5'"/>
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</backbone>
<sidechain>
<atom_name name="N1"/>
<atom_name name="C6"/>
<atom_name name="C5"/>
<atom_name name="C4"/>
<atom_name name="O4"/>
<atom_name name="N3"/>
<atom_name name="C2"/>
<atom_name name="O2"/>
<atom_name name="H3"/>
<atom_name name="H5"/>
<atom_name name="H6"/>
</sidechain>
<terminus terminus_type='C5_PRIME_PHOSPHATE'>
<atom_name name="P"/>
<atom_name name="OP1"/>
<atom_name name="OP2"/>
</terminus>
<terminus terminus_type='C5_PRIME_HYDROXYL'>
<atom_name name="HO5'"/>
</terminus>
<terminus terminus_type='C3_PRIME_HYDROXYL'>
<atom_name name="HO3'"/>
</terminus>
<equivalent_group group_type="METHYLENE">
<atom_name name="H5'"/>
<atom_name name="H5''"/>
</equivalent_group>
</residue>
</topology>
ARIA is part of the ELIXIR infrastructure.